Dr Noorul Amin

Postdoctoral Research Fellow

School of Veterinary Science

noorul.amin@uq.edu.au

Researcher biography

Noorul Amin is SAAFE CRC's foundational Postdoctoral Research Fellow in the data analytics program. His research focuses on advanced computational techniques in biological data, including omics data analysis and tools development. With a background in applying machine learning and data mining approaches to biological challenges, Noorul's current work centres on the intersection of data analytics and antimicrobial resistance, particularly in agribusiness, food security, and the environment.

He is seeking Honours and PhD students interested in applying machine learning, cloud computing, and big data approaches to biological research problems.

Publications

Journal Articles (8)

Conference Papers (4)

Journal Articles

Peng, Hongke, Jabbari, Jafar S., Tian, Luyi, Wang, Changqing, You, Yupei, Chua, Chong Chyn, Anstee, Natasha S., Amin, Noorul, Wei, Andrew H., Davidson, Nadia, Roberts, Andrew W., Huang, David, Ritchie, Matthew E and Thijssen, Rachel (2025). Single-cell Rapid Capture Hybridization sequencing to reliably detect isoform usage and coding mutations in targeted genes. Genome Research, gr.279322.124. doi: 10.1101/gr.279322.124

Cheng, Oliver, Ling, Min Hao, Wang, Changqing, Wu, Shuyi, Ritchie, Matthew E., Goke, Jonathan, Amin, Noorul and Davidson, Nadia M. (2024). Flexiplex: a versatile demultiplexer and search tool for omics data. Bioinformatics, 40 (3) btae102, 3. doi: 10.1093/bioinformatics/btae102

Peng, Hongke, Jabbari, Jafar S., Tian, Luyi, Chua, Chong Chyn, Natasha S. Anstee, Amin, Noorul, Wei, Andrew H., Davidson, Nadia M., Roberts, Andrew W., Huang, David C. S., Ritchie, Matthew E. and Thijssen, Rachel (2024). Single-cell Rapid Capture Hybridization sequencing (scRaCH-seq) to reliably detect isoform usage and coding mutations in targeted genes at a single-cell level. bioRxiv, 1-25. doi: 10.1101/2024.01.30.577942

Amin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2021). FexRNA: exploratory data analysis and feature selection of non-coding RNA. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 18 (6), 2795-2801. doi: 10.1109/tcbb.2021.3057128

Amin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2020). Author Correction: Evaluation of deep learning in non-coding RNA classification. Nature Machine Intelligence, 2 (4), 236-236. doi: 10.1038/s42256-019-0143-z

Amin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2020). Reply to: LncADeep performance on full-length transcripts. Nature Machine Intelligence, 3 (3), 196-196. doi: 10.1038/s42256-019-0107-3

Amin, Noorul, McGrath, Annette and Chen, Yi-Ping Phoebe (2019). Evaluation of deep learning in non-coding RNA classification. Nature Machine Intelligence, 1 (5), 246-256. doi: 10.1038/s42256-019-0051-2

Han, Yongkoo, Park, Kisung, Hong, Jihye, Ulamin, Noor and Lee, Young-Koo (2015). Distance-constraint k-nearest neighbor searching in mobile sensor networks. Sensors, 15 (8), 18209-18228. doi: 10.3390/s150818209

Conference Papers

Chua, Chong Chyn, Anstee, Natasha, Flensburg, Christoffer, Teh, Charis, Ivey, Adam, Amin, Noorul, Thijssen, Rachel, Bohlander, Stefan K., Kakadia, Purvi M., Xu, Zhen, Fong, Chun Yew, Ting, Stephen, Loo, Sun, Tiong, Ing Soo, Gray, Daniel, Fleming, Shaun, Davidson, Nadia, Roberts, Andrew W., Majewski, Ian, Wei, Andrew H. and Brown, Fiona C. (2023). Venetoclax has potent efficacy in NPM1 mutated AML with acquired resistance associated with either perturbed pro-survival signalling or NPM1 wild-type populations. 65th ASH Annual Meeting, San Diego, CA United States, 9-12 December 2023. Washington, DC United States: American Society of Hematology. doi: 10.1182/blood-2023-185321

Amin, Noorul, Khan, Kifayat Ullah, Dolgorsuren, Batjargal and Lee, Young-Koo (2017). Extracting top-K interesting subgraphs with weighted query semantics. 2017 IEEE International Conference on Big Data and Smart Computing (BigComp), Jeju, South Korea, 13-16 February 2017. New York, NY USA: Institute of Electrical and Electronics Engineers. doi: 10.1109/bigcomp.2017.7881695

Khan, Kifayat Ullah, Rasel, Mostofa Kamal, Noorulamin, Muhammad, Nawaz, Waqas and Lee, Young-Koo (2016). On efficiently summarizing a large dynamic graph. 2016 International Conference on Big Data and Smart Computing (BigComp), Hong Kong, China, 18-20 January 2016. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/bigcomp.2016.7425944

Amin, Noorul, Khan, Kifayat Ullah and Lee, Young-Koo (2015). Analyzing subgraph isomorphism on graphs with diverse structural properties. BigDAS '15: 2015 International Conference on Big Data Applications and Services, Jeju Island, South Korea, 20-23 October 2015. New York, NY USA: Association for Computing Machinery. doi: 10.1145/2837060.2837088